Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs4245739
rs4245739
MDM4
0.708 0.360 1 204549714 3 prime UTR variant C/A;G snv 0.77; 6.2E-06
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 1 2013 2015
dbSNP: rs1058205
rs1058205
KLK3
0.925 0.080 19 50860142 3 prime UTR variant C/T snv 0.75 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 1 2008 2018
dbSNP: rs6465657
rs6465657
LMTK2
0.807 0.280 7 98187015 intron variant C/T snv 0.41 0.37
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 2 2008 2009
dbSNP: rs2292884
rs2292884
MLPH
0.925 0.080 2 237534583 missense variant A/G snv 0.28 0.34
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.710 1.000 1 2011 2011
dbSNP: rs130067
rs130067
CCHCR1
0.851 0.200 6 31150734 missense variant T/G snv 0.23 0.21
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2011 2011
dbSNP: rs17632542
rs17632542
KLK3
0.925 0.080 19 50858501 missense variant T/C snv 5.5E-02 4.9E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.750 0.667 1 2011 2015
dbSNP: rs115338764
rs115338764
IK
1.000 0.080 5 140661602 non coding transcript exon variant G/A snv 4.4E-03 1.8E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs6880234
rs6880234
PCDHA7 ; PCDHA6 ; PCDHA5 ; PCDHA4 ; PCDHA3 ; PCDHA2 ; PCDHA1
1.000 0.080 5 140836371 missense variant C/G snv 4.4E-03 1.6E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs113425597
rs113425597
PCDHA4 ; PCDHA3 ; PCDHA2 ; PCDHA1
1.000 0.080 5 140807616 synonymous variant G/A;C;T snv 4.0E-06; 4.4E-03; 4.0E-06
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs61749035
rs61749035
PCDHGA2 ; PCDHGA1
1.000 0.080 5 141339183 missense variant G/T snv 3.4E-03 1.4E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs140712764
rs140712764
F13A1
1.000 0.080 6 6266621 missense variant C/T snv 1.0E-04 2.4E-04
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2013 2013
dbSNP: rs1447295
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.917 8 2007 2018
dbSNP: rs4242384
rs4242384 		0.882 0.160 8 127506309 regulatory region variant C/A snv 0.88
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 6 2008 2013
dbSNP: rs7837688
rs7837688 		0.925 0.080 8 127527115 intergenic variant T/G snv 0.91
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.710 1.000 6 2007 2013
dbSNP: rs6983267
rs6983267
POU5F1B ; CASC8 ; PCAT1 ; CCAT2
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.857 5 2007 2017
dbSNP: rs1016343
rs1016343
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 4 2008 2013
dbSNP: rs10993994
rs10993994
MSMB
0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 4 2008 2019
dbSNP: rs1456315
rs1456315
PCAT1 ; PRNCR1 ; CASC19
0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 4 2010 2014
dbSNP: rs4242382
rs4242382 		0.763 0.240 8 127505328 intergenic variant A/G;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 4 2008 2015
dbSNP: rs7501939
rs7501939
HNF1B
0.776 0.280 17 37741165 intron variant C/T snv 0.41
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 4 2008 2018
dbSNP: rs10896449
rs10896449 		0.827 0.200 11 69227200 intergenic variant A/G snv 0.53
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 3 2008 2013
dbSNP: rs12653946
rs12653946
CTD-2194D22.4
0.882 0.080 5 1895715 intron variant C/T snv 0.43
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 3 2010 2013
dbSNP: rs1512268
rs1512268
LOC107986930
0.851 0.160 8 23668950 intergenic variant T/C snv 0.50
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.710 1.000 3 2009 2013
dbSNP: rs16901979
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.950 3 2007 2018
dbSNP: rs1859962
rs1859962
CASC17
0.882 0.160 17 71112612 intron variant G/T snv 0.56
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.770 0.900 3 2008 2016